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Bioinformatics links and tools


NCBI's tools http://www.ncbi.nlm.nih.gov/Tools/

EBI tools http://www.ebi.ac.uk/Tools/

Expasy tools http://ca.expasy.org/

Molecular Station http://www.molecularstation.com/

The Virtual Library of Biochemistry, Molecular Biology and Cell Biology http://www.biochemweb.org/


Multiple Sequence Alignment Tools

A collection of MSA software  http://en.wikipedia.org/wiki/List_of_sequence_alignment_software

MAFFT http://mafft.cbrc.jp/alignment/software/


Protein analysis and structural predictions

A collection of software http://en.wikipedia.org/wiki/Protein_structure_prediction

Swiss-Model http://swissmodel.expasy.org/

PHYRE http://www.sbg.bio.ic.ac.uk/~phyre/

iTasser http://zhanglab.ccmb.med.umich.edu/I-TASSER/

Pairwise structural comparison at EBI (Dali Lite) http://www.ebi.ac.uk/Tools/dalilite/index.html

Pairwise structural comparison at CATH (SSAP) http://www.cathdb.info/cgi-bin/SsapServer.pl

Visualization of elctrostatic potential http://www.charmm-gui.org/?doc=input/pbeqsolver



more coming soon